Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTTGCCTCATTTTGGCAGATCTACAGTATGCCAT
...((((((((..(((((((((&.))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047431134
GeneSymbolPCNX1
Binding site6392,6432
Score0.846
Seed0
Au0.632
Energy-21.3
Binding len19
Me-11.15
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure