Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTTGCTCTGCGGCATGTC
..((((((((((..((((((.&)))))).....))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047431134
GeneSymbolPCNX1
Binding site3117,3140
Score0.846
Seed1
Au0.529
Energy-20.3
Binding len23
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure