Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGAGTCCCAGCAGCTGGGCCAGA
..(((((.(((((((((((((.&)))))))))))...........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001007468
GeneSymbolSMARCB1
Binding site4989,5019
Score0.846
Seed0
Au0.338
Energy-26.1
Binding len30
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure