Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGAGGGCAGGTTTCTAGAAAGTGCCACCAGTGG
((((((((.(((((((((.((.&))))))))))).)).................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001007551
GeneSymbolCT45A5
Binding site171,209
Score0.821
Seed1
Au0.441
Energy-22.6
Binding len38
Me-4.994
Phylopstem-0.5692055777777778
Phylopflank0.4551824262499997
Longest consecutive pairings11
Position of longest consecutive pairings27
Pairings in 3prime end6
Position5UTR
2D Structure