Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTGCATTTTGTGCACCGGGA
.(((((((((.(((((((((((&))))))))))).)))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001007792
GeneSymbolNTRK1
Binding site1897,1921
Score0.923
Seed1
Au0.382
Energy-21.0
Binding len24
Me-6.618
Phylopstem2.5384693636363633
Phylopflank4.101839055
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure