Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAGATTGAAACCCAGACAGAGGGGAGCACAGA
..(((((((((((((((((...&.)))))))....))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001008211
GeneSymbolOPTN
Binding site1266,1301
Score1.0
Seed1
Au0.5
Energy-25.8
Binding len24
Me-4.957
Phylopstem1.876917109090909
Phylopflank1.644334695
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure