Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGAAGGCAGCTGCC
..((((((((..((...((((&))))...))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047431171
GeneSymbolPPP1R13B
Binding site229,249
Score0.923
Seed1
Au0.544
Energy-21.1
Binding len20
Me-12.097
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure