Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCAAGATTGCCCAGCAGATGAATTGCAAGATGGGAGGAGCCCTCTGGAAGGTGG
(((((((((((((((((((((.&.))))))))..................)))))))))........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001008496
GeneSymbolPIWIL3
Binding site2288,2345
Score0.846
Seed1
Au0.529
Energy-25.5
Binding len49
Me-3.938
Phylopstem0.8647096297872341
Phylopflank1.6547362825000005
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure