Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACGTTTCAGGTGCTAGGG
.((((((((..(((((((....&)))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001008541
GeneSymbolMXI1
Binding site2556,2576
Score0.962
Seed1
Au0.588
Energy-19.5
Binding len20
Me-7.861
Phylopstem1.4387655
Phylopflank1.1069294349999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure