Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAGAGGGGCTCTCCTGAGTGGAAGCCAC
...((((((((((((((((((.&)))))))))))))..............))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001008693
GeneSymbolCST9
Binding site1396,1429
Score0.846
Seed0
Au0.368
Energy-24.6
Binding len33
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings20
Pairings in 3prime end7
Position3UTR
2D Structure