Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGAATGGGCAAGGTGG
((((.((((.((((((((....&)))))))).))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001008693
GeneSymbolCST9
Binding site1219,1239
Score0.923
Seed0
Au0.412
Energy-22.6
Binding len20
Me-9.299
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure