Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAGCTGTAGCTTGCGGT
((((((((((((((.(.(((.&)))).)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047431195
GeneSymbolCCDC197
Binding site11,32
Score0.923
Seed1
Au0.393
Energy-21.2
Binding len21
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure