Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGGGAGGTGCCAGGG
.((((((((....(.(((....&))).)...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001009568
GeneSymbolSMPDL3B
Binding site219,236
Score0.846
Seed1
Au0.412
Energy-17.8
Binding len17
Me-13.232
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure