Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCACCCTGGAGGAGCTG
....(((((((((..((((.((&)).)))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001009611
GeneSymbolPRAMEF4
Binding site152,170
Score0.846
Seed0
Au0.426
Energy-20.7
Binding len18
Me-11.139
Phylopstem-0.36993055555555554
Phylopflank-0.30917724124999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure