Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTAGGTCTTAGGTACATCCTAAAGGGAGCACAGA
..(((((((((((..((((...&.))))..)))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001009611
GeneSymbolPRAMEF4
Binding site1567,1603
Score0.846
Seed1
Au0.574
Energy-21.3
Binding len20
Me-6.549
Phylopstem0.2543638833333334
Phylopflank-0.55817267
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure