Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGAAAGTGTCCCAGTAACAACGCACCCAGCTGCAGC
(((((((((.((((((.....&.))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047431290
GeneSymbolSNX27
Binding site5562,5603
Score0.923
Seed1
Au0.441
Energy-20.4
Binding len18
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure