Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCAGAAACGGGAGGCATTGGAAGCCAGGA
.((((((...((((((......&.))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001009899
GeneSymbolUSF3
Binding site325,357
Score0.846
Seed1
Au0.544
Energy-19.5
Binding len17
Me-8.406
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end2
Position5UTR
2D Structure