Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCCCAGTCCACAGAGCCAGC
..(((((((....((((((...&.))))))......))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001009984
GeneSymbolDNAAF9
Binding site4193,4221
Score1.0
Seed1
Au0.426
Energy-23.2
Binding len21
Me-13.66
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure