Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGCTGGGAGGCCC
....(((((((..((((((((.&))))))))..))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001009998
GeneSymbolSSBP4
Binding site1456,1475
Score0.846
Seed0
Au0.485
Energy-22.8
Binding len19
Me-14.182
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure