Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAAGGATGGAGGGAATTATTCCTGGAGCATAACCTGCCTCTCAGATCGAGGTGT
(((((((((((((((((((...&)))))))))))).............................)))...........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001010847
GeneSymbolLRRC38
Binding site1489,1549
Score0.923
Seed1
Au0.471
Energy-22.6
Binding len60
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings48
Pairings in 3prime end5
Position3UTR
2D Structure