Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAATGGGGAGCA
.....(((((((..((((((..&))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001010859
GeneSymbolC22orf42
Binding site82,98
Score0.846
Seed0
Au0.441
Energy-21.0
Binding len16
Me-15.812
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure