Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGGAGCATTAAGCCAGG
..(((((((.(((((((((...&))))))))).).....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001010862
GeneSymbolSPIN3
Binding site1936,1959
Score0.846
Seed1
Au0.456
Energy-21.8
Binding len23
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure