Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGCGGGGCTGGCGG
(.(((((((((((((((((...&))))))))).)))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001010881
GeneSymbolC1orf167
Binding site2979,3000
Score0.846
Seed1
Au0.279
Energy-27.0
Binding len21
Me-5.101
Phylopstem0.4107010000000001
Phylopflank-0.2504644375
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure