Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCGCCGCCGCTCCCGCTGCTGTCGCCGCGCAGAGCCGGAGCAGGAGCCAC
...((((((((((((((.(...&.).)))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001010935
GeneSymbolRAP1A
Binding site19,72
Score0.846
Seed0
Au0.25
Energy-24.1
Binding len19
Me-6.515
Phylopstem2.1208831333333333
Phylopflank1.9695108083333333
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure