Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTGGAAGATGAGCGAGTA
.(((.((((.(((((((((...&)))))))))..)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001010935
GeneSymbolRAP1A
Binding site622,642
Score0.923
Seed0
Au0.529
Energy-20.3
Binding len20
Me-9.155
Phylopstem-0.3991422222222222
Phylopflank0.07748866912499998
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure