Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTTTCACCCATGTTGGCCAGGC
.((((((..(((..........&.)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001010989
GeneSymbolHERPUD1
Binding site2642,2666
Score0.923
Seed1
Au0.485
Energy-15.6
Binding len13
Me-10.278
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure