Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAGGCACGAGAATCACTTGAACCCGGGAGGGAGAGGTTGCAGTGA
(((((.(((((((((((((...&.)))))))))))))......))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001011513
GeneSymbolPDLIM5
Binding site2261,2308
Score1.0
Seed0
Au0.426
Energy-26.5
Binding len26
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure