Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCCACAGAGCTAAACGTTTTAGAGTACCAACCATTGTGTGCTGTGAGGTA
(((((((((((((((.......&.)))))))))))...)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001011658
GeneSymbolTRAPPC2
Binding site182,235
Score0.923
Seed1
Au0.588
Energy-18.9
Binding len20
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end1
Position5UTR
2D Structure