Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGGGATTTGCAGCTGCT
..((((((((((((.((((..&)))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047431437
GeneSymbolNIN
Binding site6216,6235
Score0.846
Seed1
Au0.368
Energy-22.5
Binding len19
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure