Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCCTTAAAAAATATGATATGCCAGA
..((((((((..((((......&.))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001011885
GeneSymbolBTBD1
Binding site2906,2934
Score0.846
Seed1
Au0.647
Energy-15.3
Binding len16
Me-11.129
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure