Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTCAAGCAGGTGTGCCAGA
..(((((((((..(((......&.))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001012415
GeneSymbolSOHLH1
Binding site429,451
Score0.923
Seed1
Au0.382
Energy-18.2
Binding len15
Me-9.593
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure