Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAACCGGAAGCCAGGTT
(((((((......(((((....&))))).......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001012506
GeneSymbolCCDC66
Binding site1296,1316
Score0.923
Seed1
Au0.515
Energy-16.6
Binding len20
Me-16.011
Phylopstem0.8455447142857143
Phylopflank0.6246044539999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure