Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAGACCCCAAAGCAAGCAGGGGGCCAGTGG
(((((((((((((((((((...&))))))).............)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001012508
GeneSymbolSPRN
Binding site1638,1671
Score0.846
Seed1
Au0.324
Energy-28.4
Binding len33
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure