Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTATCAACAATTTGCTGCAAG
(((((((....((((((((((&)))))).)))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047431589
GeneSymbolPRKD1
Binding site2358,2382
Score0.885
Seed1
Au0.618
Energy-18.9
Binding len24
Me-11.375
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure