Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCCCAGGGAGGGACCCACCAGAGCACAAGAGAAGGTGG
((((((.(((((((((((((.(&).))))))))))))).))..................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001012516
GeneSymbolITM2C
Binding site1268,1309
Score0.885
Seed0
Au0.353
Energy-24.4
Binding len41
Me-5.481
Phylopstem0.002555423076923097
Phylopflank0.2391513387500001
Longest consecutive pairings13
Position of longest consecutive pairings26
Pairings in 3prime end7
Position3UTR
2D Structure