Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGTCAGGAAGGAAAATCAGTA
.(((((.((((((((((.(((.&))).))))))))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001012994
GeneSymbolSNX30
Binding site2670,2693
Score0.846
Seed0
Au0.544
Energy-22.5
Binding len23
Me-5.337
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure