Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGCATGGCTGTGGCCAGTA
.(((((((((...((((((((.&))))))))...))....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001013254
GeneSymbolLSP1
Binding site1253,1278
Score0.923
Seed1
Au0.382
Energy-26.7
Binding len25
Me-11.254
Phylopstem1.813742076923077
Phylopflank1.6370858675
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure