Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGGCCCAGGACGAGGAGGGAGGCGGC
..(((.(((((((((((((.((&))..))))))))......))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001013254
GeneSymbolLSP1
Binding site622,650
Score0.923
Seed0
Au0.309
Energy-23.4
Binding len28
Me-6.858
Phylopstem-0.537719952631579
Phylopflank-0.16357984874999998
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end7
Position5UTR
2D Structure