Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCTCAGTGGGAAGAGGAGCCGGC
..((((((((((((((((((..&))))))).....))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001013622
GeneSymbolFAM53A
Binding site988,1012
Score0.846
Seed1
Au0.324
Energy-26.1
Binding len24
Me-4.957
Phylopstem-0.34668279565217397
Phylopflank-0.7773835849999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure