Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGAGGAAGGAGAGGATGACAGAGACAGCACCAATGGCCAGG
..(((((((((((((.(((...&))).)))))))).........................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001013631
GeneSymbolHNRNPCL1
Binding site1049,1092
Score0.846
Seed1
Au0.485
Energy-21.1
Binding len43
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end4
PositionCDS
2D Structure