Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAAACCCTTTGCGTTTTTCTATGTGTGCTTGTATGTCTGCATATGTCCAGGTG
((((((((((...(((((((..&.))))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001013742
GeneSymbolDGKK
Binding site4577,4634
Score0.897
Seed1
Au0.529
Energy-20.5
Binding len20
Me-11.398
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure