Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGATTCATATGAAATGTTACACATTGTTGCACAGGC
.(((((((.(((((((......&.)))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001014434
GeneSymbolLHX9
Binding site3590,3628
Score0.846
Seed1
Au0.662
Energy-17.5
Binding len17
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
Position3UTR
2D Structure