Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTTACTTCAACGGTACGGGCACCGTGCAGAAAGGGCGGCCCCGGAAGCGGAAGAGCCCAGCGCTGGGAGTGG
(((((((((((((((((((((.&))))).........................))))))))..))))...........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001014434
GeneSymbolLHX9
Binding site677,753
Score0.923
Seed1
Au0.412
Energy-20.5
Binding len76
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure