Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCAACTGATGCAGGAGCCACCCCGGTGC
(((((((((((.((..((((((&))))))....))...)))))))).....))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001014443
GeneSymbolUSP21
Binding site2001,2033
Score0.846
Seed1
Au0.412
Energy-22.5
Binding len32
Me-8.253
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure