Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGACACTGCAGCA
.....(((((((.(((..(((&)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047431691
GeneSymbolPALS1
Binding site2474,2490
Score0.923
Seed0
Au0.5
Energy-18.9
Binding len16
Me-14.955
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure