Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTGTTGTATGCCC
....(((((((((((.((((..&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001014842
GeneSymbolTM9SF1
Binding site1148,1164
Score0.923
Seed0
Au0.456
Energy-16.9
Binding len16
Me-9.78
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure