Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGCAGGAGCCC
....(((((((..(((((....&))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001014842
GeneSymbolTM9SF1
Binding site22,36
Score0.846
Seed0
Au0.262
Energy-21.7
Binding len14
Me-14.182
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure