Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCGACTAGGCAAATCAGAGGTGGAGCTGGTGC
(((((((((((((((((.....&.))))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001015001
GeneSymbolCKMT1A
Binding site1609,1642
Score1.0
Seed1
Au0.529
Energy-23.3
Binding len20
Me-3.938
Phylopstem4.401055522222222
Phylopflank4.429819671000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure