Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCGGAATCGGGGCTGGTT
.(((((((((.((((((((...&))))))))..))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001015056
GeneSymbolRTKN
Binding site106,126
Score0.846
Seed1
Au0.338
Energy-23.3
Binding len20
Me-6.618
Phylopstem0.8435905555555555
Phylopflank0.658531298125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure