Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CATTGTTGCCAAGGA
.(((((((.((((((.......&))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001015880
GeneSymbolPAPSS2
Binding site3276,3291
Score0.846
Seed1
Au0.721
Energy-15.6
Binding len15
Me-5.083
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end1
Position3UTR
2D Structure